Instrument Data Integration Specialist (Contract Role, Part-time)
Benchling
Part-Time PositionSummary
This job is seeking professionals with a deep understanding of laboratory instruments and data integration. The role involves developing standard instrument data models to drive the industry towards FAIR data standards and supporting integration across the Benchling platform.
What you'll do
- Convert instrument outputs into standardized data models to streamline downstream analysis and ensure consistent instrument measurements.
- Work with the Allotrope Simple Model (ASM), a JSON based standard.
- Collect, evaluate, and compare instrument data output files, to determine what is ‘standard’ across instruments in a given instrument category.
- Gather, review, and assess existing Allotrope simple model (ASM) specifications.
- Map standard instrument output data from files to the Allotrope simple model (ASM) to determine opportunities for standard model extensions.
- Evaluate Allotrope data model structure to determine how & where to add fields to the ASM, to make it easy for scientific analysis.
- Participate with the Allotrope models working group and submit draft proposals for new ASMs or revisions.
- Define requirements for input instructions to be sent from Benchling to software that controls instruments.
- Define requirements for ingesting instrument results data from software that controls instruments, in addition to how that data is standardized to the Allotrope data model.
- Define end to end scientific workflows related to the experiment & techniques the instrument & software is used for.
Requirements
- Subject matter expertise in one or several instrument categories required (See below)
- Experience integrating one or more of software systems that manage instrument data listed below with LIMS, electronic notebook or other downstream systems
- Data modeling experience, especially in the realm of bio-tech
- Familiarity with JSON concepts
- Strong analytical, problem-solving, requirements definition and communication skills
Apply
Click below to be taken to the Benchling hiring page.
Location
Boston, MAContract Length
Compensation
$65,000 - $120,000 (per year)Keywords
allotrope simple model (asm) json lims electronic notebookSimilar Jobs
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